Junie is JetBrains' agentic coding tool: you run junie in a project directory and give it tasks in a terminal UI. HagiCode is a desktop and web AI programming workbench that drives agent CLIs, Junie among them, as its executor. It does not replace Junie. Junie still does the coding, and HagiCode adds sessions, proposals and commit handling around it.
If you work in a terminal, a JetBrains IDE or CI pipelines and one task at a time is enough, Junie alone is the simpler choice. If you juggle several tasks or repositories and want each change tied to a written proposal, HagiCode is worth adding on top. HagiCode does not sell models; Junie keeps its own sign-in and billing.